Guo, J., Wang, D., Pantatosaki, E., Kuang, H., Papadopoulos, G.K., Tsapatsis, M., and Kokkoli, E. (2022). A Localized Enantioselective Catalytic Site on Short DNA Sequences and Their Amphiphiles. JACS Au, 2(2):483-491.

Harris, M.A., Kuang, H., Schneiderman, Z., Shiao, M.L., Crane, A.T., Chrostek, M.R., Tăbăran, A.-F., Pengo, T., Liaw, K., Xu, B., Lin, L., Chen, C.C., O’Sullivan, M.G., Kannan, R.M., Low, W.C., and Kokkoli, E. (2021) ssDNA Nanotubes for Selective Targeting of Glioblastoma and Delivery of Doxorubicin for Enhanced Survival. Sci. Adv., 7 (49):eabl5872.

Shabana, A.M., Xu, B., Schneiderman, Z., Ma, J., Chen, C.C., and Kokkoli, E. (2021). Targeted Liposomes Encapsulating miR-603 Complexes Enhance Radiation Sensitivity of Patient-Derived Glioblastoma Stem-Like Cells. Pharmaceutics, 13 (8):1115.

Shabana, A.M., Kambhampati, S.P., Hsia, R-C., Kannan, R.M., and Kokkoli, E. (2021). Thermosensitive and Biodegradable Hydrogel Encapsulating Targeted Nanoparticles for the Sustained Co-Delivery of Gemcitabine and Paclitaxel to Pancreatic Cancer Cells. Int. J. Pharm., 593:120139.

Kuang, H., Schneiderman, Z., Shabana, A.M., Russo, G.C., Guo, J., Wirtz, D., and Kokkoli, E. (2020). Effect of an Alkyl Spacer on the Morphology and Internalization of MUC1 Aptamer‐Naphthalimide Amphiphiles for Targeting and Imaging Triple Negative Breast Cancer Cells. Bioeng. Transl. Med., 6 (1):e10194.

Ramakrishnan, V., Xu, B., Akers, J., Nguyen, T., Ma, J., Dhawan, S., Ning, J., Mao, Y., Hua, W., Kokkoli, E., Furnari, F., Carter, B.S., and Chen, C.C. (2020). Radiation-Induced Extracellular Vesicle (EV) Release of miR-603 Promotes Glioblastoma Stem Cell State. EBioMedicine, 55:102736.

Clemente, A.P.B., Kuang, H., Shabana, A.M., Labuza, T.P., and Kokkoli, E. (2019). Design of an Aptamer-Amphiphile for the Detection of β-Lactoglobulin on a Liquid Crystal Interface. Bioconjug. Chem., 30 (11):2763-2770.

Harris, M.A., Pearce, T.R., Pengo, T., Kuang, H., Forster C.L., and Kokkoli, E. (2018). Aptamer Micelles Targeting Fractalkine-Expressing Cancer Cells In Vitro and In Vivo. Nanomedicine: NBM, 14 (1):85-96.

Vidyasagar, A., Ku, S.H.,Kim, M., Kim, M., Lee, H.S., Pearce, T.R., McCormick,A.V., Bates, F.S., and Kokkoli, E. (2017). Design and Characterization of a PVLA-PEG-PVLA Thermosensitive and Biodegradable Hydrogel. ACS Macro Lett., 6 (10):1134–1139.

Li, N.K., Kuang, H., Fuss, W.H., Zauscher, S. Kokkoli, E., and Yingling, Y.G. (2017) Salt Responsive Morphologies of ssDNA-Based Triblock Polyelectrolytes in Semi-Dilute Regime: Effect of Volume Fractions and Polyelectrolyte Length. Macromol. Rapid Commun., 38 (20):1700422.

Levine, R.M., and Kokkoli, E. (2017). Dual-Ligand α5β1 and α6β4 Integrin Targeting Enhances Gene Delivery and Selectivity to Cancer Cells. J. Control. Release, 251:24-36.

Kuang, H., Ku S.H., and Kokkoli, E. (2017). The Design of Peptide-Amphiphiles as Functional Ligands for Liposomal Anticancer Drug and Gene Delivery. Adv. Drug Deliv. Rev., 110-111:80-101.

Levine, R.M., Dinh, C.V., Harris, M.A., and Kokkoli, E. (2016). Targeting HPV-Infected Cervical Cancer Cells with PEGylated Liposomes Encapsulating siRNA and the Role of siRNA Complexation with Polyethyleneimine. Bioeng. Trans. Med., 1 (2):168-180.

Lindborg, B.A., Brekke, J.H., Vegoe, A.L., Ulrich, C.B., Haider, K.T., Subramaniam, S., Venhuizen, S.L., Eide, C.R., Orchard, P.J., Chen, W., Wang, Q., Pelaez, F., Scott, C.M., Kokkoli, E., Keirstead, S.A., Dutton, J.R., Tolar, J., and O’Brien, T.D. (2016). Rapid Induction of Cerebral Organoids from Human Induced Pluripotent Stem Cells Using a Chemically Defined Hydrogel and Defined Cell Culture Medium. Stem Cells Trans. Med., 5 (7):970-979.

Shroff, K., Liu, D., Aravalli, R.N., Forster, C.L., Pengo, T., Sanders, M.A., Ebbini, E.S., and Kokkoli, E. (2016). Design Principles for Peptide-Amphiphile-Induced Liposomal Receptor-Targeting with Intracellular Thermosensitivity. ChemNanoMat, 2 (1):42-48.

Scott, C.M., Forster C.L., and Kokkoli, E. (2015). Three-Dimesional Cell Entrapment as a Function of the Weight Percent of Peptide-Amphiphile Hydrogels. Langmuir, 31 (22):6122-6129.

Lindborg, B.A., Brekke, J.H., Scott, C.M., Chai, Y.W., Ulrich, C., Sandquist, L., Kokkoli, E., and O’Brien, T.D. (2015). A Chitosan-Hyaluronan Based Hydrogel-Hydrocolloid Supports In Vitro Culture and Differentiation of Human Mesenchymal Stem/Stromal Cells (MSCs). Tissue Eng. Part A, 21 (11-12):1952- 1962.

Pearce, T.R., and Kokkoli, E. (2015). DNA Nanotubes and Helical Nanotapes via Self-Assembly of ssDNAAmphiphiles. Soft Matter, 11 (1):109-117!divAbstract

Neitzel, A.E., Petersen, M.A., Kokkoli, E., and Hillmyer, M.A. (2014). Divergent Mechanistic Avenues to an Aliphatic Polyesteracetal or Polyester from a Single Cyclic Esteracetal. ACS Macro Lett., 3 (11):1156–1160.

Waybrant, B., Pearce, T.R., and Kokkoli, E. (2014). Effect of Polyethylene Glycol, Alkyl, and Oligonucleotide Spacers on the Binding, Secondary Structure, and Self-Assembly of Fractalkine Binding FKN-S2 AptamerAmphiphiles. Langmuir, 30 (25):7465–7474.

Adil, M.M., Erdman, Z.S., and Kokkoli, E. (2014). Transfection Mechanisms of Polyplexes, Lipoplexes and PR_b Targeted and Non-Targeted Stealth Liposomes in α5β1 Integrin Bearing DLD-1 Colorectal Cancer Cells. Langmuir, 30 (13):3802-3810.

Adil, M.M., Levine, R.M., and Kokkoli, E. (2014). Increasing Cancer-Specific Gene Expression by Targeting Overexpressed α5β1 Integrin and Upregulated Transcriptional Activity of NF-κB. Mol. Pharm., 11 (3):849-858.

Atchison, N., Swindlehurst, G., Papas, K.K., Tsapatsis, M., and Kokkoli, E. (2014). Maintenance of Ischemic β Cell Viability Through Delivery of Lipids and ATP by Targeted Liposomes. Biomater. Sci., 2 (4):548-559.!divAbstract

Pearce, T.R., Waybrant, B., and Kokkoli, E. (2014). The Role of Spacers on the Self-Assembly of DNA Aptamer-Amphiphiles into Micelles and Nanotapes. Chem. Commun., 50 (2):210-212.!divAbstract

Levine, R.M., Pearce, T.R., Adil, M., and Kokkoli, E. (2013). Preparation and Characterization of LiposomeEncapsulated Plasmid DNA for Gene Delivery. Langmuir, 29 (29):9208-9215.

Petersen, M.A., Hillmyer, M.A., and Kokkoli, E. (2013). Bioresorbable Polymersomes for Targeted Delivery of Cisplatin. Bioconjug. Chem., 24 (4):533-543.

Adil, M., Belur, L., Pearce, T.R., Levine, R.M., Tisdale, A.W., Sorenson, B.S., McIvor, R.C., and Kokkoli, E. (2013).PR_b Functionalized Stealth Liposomes for Targeted Delivery to Metastatic Colon Cancer. Biomater. Sci., 1 (4):393-401.!divAbstract

Levine, R.M., Scott, C.M., and Kokkoli, E. (2013). Peptide Functionalized Nanoparticles for Nonviral Gene Delivery. Soft Matter, 9 (4):985-1004.!divAbstract

Fatehi, L., Wolf, S.M., McCullough, J., Hall, R., Lawrenz, F., Kahn, J.P., Jones, C., Campbell, S.A., Dresser, R.S., Erdman, A.G., Haynes, C.L., Hoerr, R.A., Hogle, L.F., Keane, M.A., Khushf, G., King, N.M.P., Kokkoli, E., Marchant, G., Maynard, A.D., Philbert, M., Ramachandran, G., Siegel, R.A., and Wickline, S. (2012). Recommendations for Nanomedicine Human Subjects Research Oversight: An Evolutionary Approach for an Emerging Field. J. Law Med. Eth., 40 (4):716-750.

Waybrant, B., Pearce, T.R., Wang, P., Sreevatsan, S., and Kokkoli, E. (2012). Development and Characterization of an Aptamer Binding Ligand of Fractalkine Using Domain Targeted SELEX. Chem. Commun., 48 (80):10043-10045.!divAbstract

Pangburn, T.O., Georgiou, K., Bates, F.S., and Kokkoli, E. (2012). Targeted Polymersome Delivery of siRNA Induces Cell Death of Breast Cancer Cells Dependent upon Orai3 Protein Expression. Langmuir, 28 (35):12816-12830.

Pearce, T.R., Shroff, K., and Kokkoli, E. (2012). Peptide Targeted Lipid Nanoparticles for Anticancer Drug Delivery. Adv. Mater., 24 (28):3803-3822.

Shroff, K., and Kokkoli, E. (2012). PEGylated Liposomal Doxorubicin Targeted to α5β1-Expressing MDA-MB231 Breast Cancer Cells. Langmuir, 28 (10):4729-4736.

Pangburn, T.O., Bates, F.S., and Kokkoli, E. (2012). Polymersomes Functionalized via “Click” Chemistry with the Fibronectin Mimetic Peptides PR_b and GRGDSP for Targeted Delivery to Cells with Different Levels of α5β1 Expression. Soft Matter, 8 (16):4449-4461.!divAbstract

Shroff, K., Pearce, T.R., and Kokkoli, E. (2012). Enhanced Integrin Mediated Signaling and Cell Cycle Progression on Fibronectin Mimetic Peptide Amphiphile Monolayers. Langmuir, 28 (3):1858-1865.

Garg, A., and Kokkoli, E. (2011). pH-Sensitive PEGylated Liposomes Functionalized with a FibronectinMimetic Peptide Show Enhanced Intracellular Delivery to Colon Cancer Cells. Curr. Pharm. Biotechnol., 12 (8):1135-1143.

Ramachandran, G., Wolf, S.M., Paradise, J., Kuzma, J., Hall, R., Kokkoli, E., and Fatehi, L. (2011). Recommendations for Oversight of Nanobiotechnology: Dynamic Oversight for Complex and Convergent Technology. J. Nanopart. Res., 13 (4):1345-1371.

Atchison, N., Fan, W., Brewer, D.D., Arunagirinathan, M.A., Hering, B.J., Kumar, S., Papas, K.K., Kokkoli, E., and Tsapatsis, M. (2011). Silica-Nanoparticle Coatings by Adsorption from Lysine-Silica-Nanoparticle Sols on Inorganic and Biological Surfaces. Angew. Chem. Int. Edit., 50 (7):1617-1621.

Shroff, K., Rexeisen, E.L., Arunagirinathan, M.A., and Kokkoli, E. (2010). Fibronectin-Mimetic PeptideAmphiphile Nanofiber Gels Support Increased Cell Adhesion and Promote ECM Production. Soft Matter, 6 (20):5064-5072.!divAbstract

Atchison,N.A., Fan, W., Papas, K.K., Hering, B.J., Tsapatsis, M., and Kokkoli, E. (2010). Binding of the Fibronectin-Mimetic Peptide, PR_b, to α5β1 on Pig Islet Cells Increases Fibronectin Production and Facilitates Internalization of PR_b Functionalized Liposomes. Langmuir, 26 (17):14081-14088.

Petersen, M.A., Yin, L., Kokkoli, E., and Hillmyer, M.A. (2010). Synthesis and Characterization of Reactive PEO-PMCL Polymersomes. Polym. Chem., 1 (8):1281-1290.!divAbstract

Rexeisen, E.L., Fan, W., Pangburn, T.O., Taribagil, R., Bates, F.S., Lodge, T.P., Tsapatsis, M., and Kokkoli, E. (2010). Self-Assembly of Fibronectin Mimetic Peptide-Amphiphile Nanofibers. Langmuir, 26 (3):1953- 1959.

Paradise, J., Wolf, S.M., Kuzma, J., Kuzhabekova, A., Tisdale, W.A., Kokkoli, E., and Ramachandran, G. (2009). Developing U.S. Oversight Strategies for Nanobiotechnology: Learning from Past Oversight Experiences. J. Law Med. Eth., 37 (4):688-705.

Paradise, J., Tisdale, W.A., Hall, R.F., and Kokkoli, E. (2009). Evaluating Oversight of Human Drugs and Medical Devices: A Case Study of the FDA and Implications for Nanobiotechnology. J. Law Med. Eth., 37 (4):598-624.

Paradise J., Wolf, S.M., Kuzma, J., Ramachandran, G., and Kokkoli E. (2009). Introduction: The Challenge of Developing Oversight Approaches to Nanobiotechnology. J. Law Med. Eth., 37 (4):543-545.

Pangburn, T.O., Petersen, M.A., Waybrant, B., Maroof, M.A., and Kokkoli, E. (2009). Peptide and Aptamer Functionalized Nanovectors for Targeted Delivery of Therapeutics. J. Biomech. Eng.,131 (7):074005.

Demirgöz, D., Pangburn, T.O., Davis, K.P., Lee, S., Bates, F.S., and Kokkoli, E. (2009). PR_b-Targeted Delivery of Tumor Necrosis Factor-α by Polymersomes for the Treatment of Prostate Cancer. Soft Matter, 5 (10):2011–2019.!divAbstract

Snyder, M.A., Demirgöz, D., Kokkoli, E., and Tsapatsis, M. (2009). Benign, 3D Encapsulation of Sensitive Mammalian Cells in Porous Silica Gels Formed by Lys-Sil Nanoparticle Assembly. Microporous Mesoporous Mat., 118 (1-3):387-395.

Garg, A., Tisdale, A.W., Haidari, E., and Kokkoli, E. (2009). Targeting Colon Cancer Cells using PEGylated Liposomes Modified with a Fibronectin-Mimetic Peptide. Int. J. Pharm., 366 (1-2):201-210.

Demirgöz, D., Garg, A., and Kokkoli, E. (2008). PR_b-Targeted PEGylated Liposomes for Prostate Cancer Therapy. Langmuir, 24 (23):13518-13524.

Craig, J.A., Rexeisen, E.L., Mardilovich, A., Shroff, K., and Kokkoli, E. (2008). Effect of Linker and Spacer on the Design of a Fibronectin-Mimetic Peptide Evaluated via Cell Studies and AFM Adhesion Forces. Langmuir, 24 (18):10282-10292.

Paradise, J., Diliberto, G.M., Tisdale, W.A. and Kokkoli, E. (2008). Exploring Emerging Nanobiotechnology Drugs and Medical Devices. Food Drug Law J., 63 (2):407-420.

Paradise, J., Wolf, S.M., Ramachandran, G., Kokkoli, E., Hall R., and Kuzma, J. (2008). Developing Oversight Frameworks for Nanobiotechnology. Minn. J.L. Sci. Tech., 9 (1):399-416.

Kokkoli, E., Mardilovich, A., Wedekind, A., Rexeisen, E.L., Garg, A., and Craig, J.A. (2006). Self-Assembly and Applications of Biomimetic and Bioactive Peptide-Amphiphiles. Soft Matter, 2 (12):1015-1024.!divAbstract

Davis, T.M., Drews, T.O., Ramanan, H., He, C., Dong, J., Schnablegger, H., Katsoulakis, M.A., Kokkoli, E., McCormick, A.V., Penn, R.L., and Tsapatsis, M. (2006). Mechanistic Principles of Nanoparticle Evolution to Zeolite Crystals. Nat. Mater., 5 (5):400-408.

Ochsenhirt, S.E., Kokkoli, E., McCarthy, J.B., and Tirrell, M. (2006). Effect of RGD Secondary Structure and the Synergy Site PHSRN on Cell Adhesion, Spreading and Specific Integrin Engagement. Biomaterials, 27 (20):3863–3874.

Mardilovich, A., Craig, J.A., McCammon, M.Q., Garg, A., and Kokkoli, E. (2006). Design of a Novel Fibronectin-Mimetic Peptide-Amphiphile for Functionalized Biomaterials. Langmuir, 22 (7):3259-3264.

Mardilovich, A., and Kokkoli, E. (2005). Patterned Biomimetic Membranes: Effect of Concentration and pH. Langmuir, 21 (16):7468-7475.

Kokkoli, E., Kasinskas, R.W., Mardilovich, A., and Garg, A. (2005). Fractalkine Targeting with a Receptor Mimicking Peptide-Amphiphile. Biomacromolecules, 6 (3):1272-1279.

Kokkoli, E., and Mardilovich, A. (2005). The Use of Atomic Force Microscopy in Characterizing Ligand-Receptor (α5β1 Integrin) Interactions. Applications of Scanned Probe Microscopy to Polymers, 897:182- 192.

Garg, A., and Kokkoli, E. (2005). Characterizing Particulate Drug Delivery Carriers with Atomic Force Microscopy. IEEE Eng. Med. Biol. Mag., 24 (1):87-95.

Diaz, I., Kokkoli, E., Terasaki, O., and Tsapatsis, M. (2004). Surface Structure of Zeolite (MFI) Crystals. Chem. Mater., 16 (25):5226-5232.

Ramanan, H., Kokkoli, E., and Tsapatsis, M. (2004). On the TEM and AFM Evidence of Zeosil Nanoslabs Present during the Synthesis of Silicalite-1. Angew. Chem. Int. Edit., 43 (35):4558-4561.

Mardilovich, A., and Kokkoli, E. (2004). Biomimetic Peptide-Amphiphiles for Functional Biomaterials: The Role of GRGDSP and PHSRN. Biomacromolecules, 5 (3):950-957.

Kokkoli, E., Ochsenhirt, S.E., and Tirrell, M. (2004). Collective and Single-Molecule Interactions of α5β1 Integrins. Langmuir, 20 (6):2397-2404.

Lai, Z., Bonilla, G., Diaz, I., Nery, G., Sujaoti, K., Amat, M.A., Kokkoli, E., Terasaki, O., Thompson, R.W., Tsapatsis, M., and Vlachos, D.G. (2003). Microstructural Optimization of a Zeolite Membrane for Organic Vapor Separation. Science, 300 (5618):456-460.

Hansma, H.G., Clegg, D.O., Kokkoli, E., Oroudjev, E., and Tirrell, M. (2002). Analysis of Matrix Dynamics by Atomic Force Microscopy. Methods Cell Biol., 69:163-193.

Tirrell, M., Kokkoli, E., and Biesalski, M. (2002). The Role of Surface Science in Bioengineered Materials. Surf. Sci., 500 (1-3):61-83.

Kokkoli, E., and Zukoski, C.F. (2001). Surface Pattern Recognition by a Colloidal Particle. Langmuir, 17 (2):369-376.

Kokkoli, E., and Zukoski, C.F. (2000). Interaction Forces Between Hydrophobic and Hydrophilic Self-Assembled Monolayers. J. Colloid Interface Sci., 230 (1):176-180.

Kokkoli, E., and Zukoski, C.F. (2000). Surface Forces Between Hydrophilic Self-Assembled Monolayers in Aqueous Electrolytes. Langmuir, 16 (14):6029-6036.

Nikolakis, V., Kokkoli, E., Tirrell, M., Tsapatsis, M., and Vlachos, D.G. (2000). Zeolite Growth by Addition of Subcolloidal Particles: Modeling and Experimental Validation. Chem. Mater., 12 (3):845-853.

Kokkoli, E., and Zukoski, C.F. (1999). Effect of Solvents on Interactions Between Hydrophobic Self-Assembled Monolayers. J. Colloid Interface Sci., 209 (1):60-65.

Kokkoli, E., and Zukoski, C.F. (1998). Interactions Between Hydrophobic Self-Assembled Monolayers. Effect of Salt and the Chemical Potential of Water on Adhesion. Langmuir, 14 (5):1189-1195.

Kokkoli, E., and van Swol, F. (1998). Swelling of Colloidal Systems. J. Chem. Phys., 108 (11):4675-4682.